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Reporting Tools
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DESeq2: Analyzing just two normal+tumour pairs
deseq2
reporting tools
5.5 years ago
mmokrejs
• 0
3
votes
7
replies
1.9k
views
ReportingTools Segmentation fault
reportingtools
reporting tools
updated 6.1 years ago by
becker.gabriel
▴ 10 • written 6.1 years ago by
michael
▴ 20
0
votes
0
replies
866
views
Error with Reportingtools using ENSEMBL gene ID
reporting tools
modifyDF
survival
7.9 years ago
cagenet34
▴ 20
1
vote
4
replies
2.1k
views
Reporting Tools error
Reporting Tools
updated 9.1 years ago by
Mayte Suarez-Farinas
▴ 510 • written 9.7 years ago by
Mayte
• 0
4 results • Page
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Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Comment: How to arrange multiple plots into one page in NOISeq?
by
baptiste.bidon
• 0
Hello everyone, I am new on this site but not a noob in R (I guess). I am facing the same problem. For me, it depends on the NOIseq plot fu…
Comment: ChAMP installation issue
by
Tahirah
• 0
Hello. Could you please share how you managed to install ChAMP in R 4.4.0? I also have R 4.4.0 and Bioconductor 3.19 version and ChAMP fail…
Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
by
James W. MacDonald
66k
Yes, you can use `limma`.
Comment: Ensembl plants at annotationHub?
by
Johannes Rainer
★ 2.0k
You can get the `EnsDb` EnsDb.Taestivum.v112.sqlite (for Ensembl 112/ ensemblgenomes 59) [here](https://www.dropbox.com/sh/msic0luivbldmb7/…
Votes
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
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